DNA-Enabled Integrated Molecular Systems for Computation and Sensing
  C. LaBoda, H. Duschl, C. Dwyer
Acc. Chem. Res., 2014, 47 (6), pp 1816-1824.

RETLab: A fast design-automation framework for arbitrary RET networks
  M. Mottaghi, A. Rallapalli, C. Dwyer
Proceedings of the Design, Automation & Test in Europe Conference (DATE), Dresden, March 2014.

Nanophotonic Information Physics: Nanointelligence and Nanophotonic Computing, M. Naruse (Ed.)
"Chapter 2: DNA Self-assembled Nanostructures for Resonance Energy Transfer Circuits"
  C. Dwyer, A. Rallapalli, M. Mottaghi, S. Wang
Springer, 2014.

News highlight!
Optical storage: DNA multiplexing, Nature Photonics, 7, 584 (2013)

Thousand-fold increase in optical storage density by polychromatic address multiplexing on self-assembled DNA nanostructures 
 M. Mottaghi, C. Dwyer.
Advanced Materials, DOI: 10.1002/adma.201301141, 2013.

Modeling and simulation of a nanoscale optical computing system
 J. Pang, A.R. Lebeck, C. Dwyer.
Journal of Parallel and Distributed Computing, in press, 2013.

The Use of Photosensitizers in Dynamic Resonance Energy Transfer
 H. Duschl, C. Dwyer.
Proceedings of the Conference on the Foundations of Nanoscience: Self-Assembled Architectures and Devices, April 2013.

Laser Remote Sensing Enabled by DNA Self-assembly and Resonance Energy Transfer
  S. Wang, C. Dwyer.
Proceedings of the Conference on the Foundations of Nanoscience: Self-Assembled Architectures and Devices, April 2012.

Physically Un-clonable Keys
  V. Nellore, S. Xi, C. Dwyer.
Proceedings of the Conference on the Foundations of Nanoscience: Self-Assembled Architectures and Devices, April 2012.

Optical Techniques for FRET-based Address Multiplexing
  M. Mottaghi, C. Dwyer.
Proceedings of the Conference on the Foundations of Nanoscience: Self-Assembled Architectures and Devices, April 2011.

Markov Model Analysis of Self-Assembled, Label-free Biomolecular Sensors Using Resonance Energy Transfer Logic
  V. Thusu, C. Dwyer.
Proceedings of the Conference on the Foundations of Nanoscience: Self-Assembled Architectures and Devices, April 2011.

Encoded Multichromophore Response for Simultaneous Label-Free Detection
(PDF here) (Supporting information here)
 Constantin Pistol, Vincent Mao, Viresh Thusu, Alvin R. Lebeck, Chris Dwyer.
Small, vol. 6, no. 7, 843-850, 2010.

Routing in Self-Organizing Nano-Scale Irregular Networks,
  Y. Liu, C. Dwyer, A. R. Lebeck.
ACM Journal on Emerging Technologies in Computing Systems (JETC), vol. 6, no. 1, art. 3, 1-22, 2010.


Architectural Implications of Nanoscale Integrated Sensing and Computing
  C. Pistol, W. Chongchitmate, C. Dwyer, A. R. Lebeck.
IEEE Micro, vol. 30, no. 1, 2010.
(Selected for the special issue on "Top Picks from the Computer Architecture Conferences of 2009")

Connecting fabrication defects to fault models and SPICE simulations for DNA self-assembled nanoelectronics
  V. Mao, V. Thusu, C. Dwyer, K. Chakrabarty.
IET Computers & Digital Techniques, vol. 3, no. 6, 553-569, 2009.

Architectural Implications of Nanoscale Integrated Sensing and Computing
  C. Pistol, W. Chongchitmate, C. Dwyer, A. R. Lebeck.
Proceedings of the 14th International Conference on Architectural Support for Programming Languages and Operating Systems (ASPLOS-XIV), 2009.

Nanoscale Optical Computing using Resonance Energy Transfer Logic
  C. Pistol, C. Dwyer, A. R. Lebeck.
IEEE Micro, vol. 28, no. 6, 7-19, 2008.

Electrical and Mechanical Characterization of Au-CdSe-Au Heterostructured Nanowires
  K. Skinner, C. Dwyer, M. R. Falvo, R. M. Taylor, S. Washburn.
Proceedings of the Materials Research Society Spring Meeting, San Francisco, CA, 2008.

Fabrication Defects and Fault Models for DNA Self-Assembled Nanoelectronics
  V. Mao, C. Dwyer, K. Chakrabarty.
International Test Conference (ITC), Paper 31.1, 2008.
(Selected in 2009 as one of the Top-10 papers from ITC 2008)

Quantitative Analysis of Individual Metal-CdSe-metal Nanowire Field-effect Transistors
  K. Skinner, C. Dwyer, S. Washburn.
Applied Physics Letters, vol. 92, no. 11, 112105, 2008.

An Introduction to DNA Self-assembled Computer Design
   C. Dwyer and A. Lebeck.
Artech House Publishers, pp. 212, Artech House Publishing, 2008.

Energy Transfer Logic on DNA Nanostructures: Enabling Molecular-Scale Amorphous Computing
    C. Dwyer, C. Pistol, A. R. Lebeck.
4th Workshop on Non-Silicon Computing (NSC-4), ISCA 2007.

A Defect Tolerant Self-organizing Nanoscale SIMD Architecture

     J. P. Patwardhan, C. Dwyer, A. R. Lebeck.
ACM Journal on Emerging Technologies in Computing Systems, vol. 3, no. 2, 1-33, July 2007.

Scalable, Low-cost, Hierarchical Assembly of Programmable DNA Nanostructures

    C. Pistol and C. Dwyer.
Nanotechnology, vol. 18, 125305-9, 2007.

Selective Functionalization of Arbitrary Nanowires
    K. Skinner, C. Dwyer, S. Washburn.
Nano Letters, vol. 6, no. 12, 2758-2762, 2006.

A Defect Tolerant Self-organizing Nanoscale SIMD Architecture
     J. P. Patwardhan, V. Johri, C. Dwyer, A. R. Lebeck.
Proceedings of the 12th International Conference on Architectural Support for Programming Languages and Operating Systems (ASPLOS-XII), October 2006.

Self-Assembled Networks: Control vs. Complexity
    J. P. Patwardhan, C. Dwyer, A. R. Lebeck.
Proceedings of the 1st IEEE Conference on Nanoscale Networks (NANONETS), September 2006.

Design Automation for DNA Self-Assembled Nanostructures
    C. Pistol, A. R. Lebeck, C. Dwyer.
Proceedings of the 43rd Design Automation Conference (DAC), July 2006.

Design and Evaluation of Fail-Stop Self-Assembled Nanoscale Processing Elements
     J. P. Patwardhan, C. Dwyer, A. R. Lebeck.
IEEE International Workshop on Design and Test of Defect-Tolerant Nanoscale Architectures (NANOARCH), June 2006.

Selective Functionalization of Hetero-structured Au-CdSe-Au Nanowires
    K. Skinner, C. Dwyer, S. Washburn.
Proceedings of the 3rd Conference on the Foundations of Nanoscience: Self-Assembled Architectures and Devices, 293-297, April 2006.

NANA: A Nano-scale Active Network Architecture
    J. P. Patwardhan, C. Dwyer, A. R. Lebeck, D. J. Sorin.
ACM Journal on Emerging Technologies in Computing Systems, vol. 2, no. 1, 1-31, January 2006.

Finite-size, Fully-Addressable DNA Tile Lattices Formed by Hierarchical Assembly Procedures

    S. H. Park, C. Pistol, S. J. Ahn, J. H. Reif, A. R. Lebeck, C. Dwyer, T. H. LaBean.
Angewandte Chemie, vol. 45, 735-739, January 2006.

Self-Assembled Computer Architecture

    C. Dwyer and A. R. Lebeck.
    (Invited chapter) to appear, Systems Self-Assembly: multidisciplinary snapshots, eds. N. Krasnogor, et al., Elsevier.

Nanowire Transistors, Gate Electrodes, and Their Directed Self-Assembly
    K. Skinner, R. L. Carroll, C. Dwyer, and S. Washburn.
The 72nd Southeastern Section of the American Physical Society (SESAPS), November 2005.

Computer-Aided Design for DNA Self-Assembly: Process and Applications
    C. Dwyer.
(Invited paper) Proceedings of the 2005 IEEE/ACM International Conference on Computer Aided Design (ICCAD), 662-667, November 2005.

Evaluating the Connectivity of Self-Assembled Networks of Nanoscale Processing Elements
     J. P. Patwardhan, C. Dwyer, A. R. Lebeck, D. J. Sorin.
IEEE International Workshop on Design and Test of Defect-Tolerant Nanoscale Architectures (NANOARCH '05), 2.1-2.8, May 2005.

A System-level Design Approach to the Evaluation of Self-assembled Computer Architectures
    C. Dwyer.
(Invited paper) Proceedings of the 2nd Conference on the Foundations of Nanoscience: Self-Assembled Architectures and Devices, 255-261, April 2005.

The Design and Fabrication of a Fully Addressable 8-tile DNA Lattice
    C. Dwyer, S. H. Park, T. LaBean, A. Lebeck.
Proceedings of the 2nd Conference on the Foundations of Nanoscience: Self-Assembled Architectures and Devices, 187-191, April 2005.

Self-Assembled Computer Architecture and the Temporal Aspects of Computing
    C. Dwyer, A. Lebeck, and D. Sorin.
IEEE Computer, vol. 38, 56-64, January 2005.

The Design of DNA Self-Assembled Computing Circuitry
    C. Dwyer, L. Vicci, J. Poulton, D. Erie, R. Superfine, S. Washburn, R. M. Taylor.
IEEE Trans. on VLSI, vol. 12, 1214-1220, November 2004.

DNA Self-assembled Parallel Computer Architectures
    C. Dwyer, J. Poulton, R. Taylor, L. Vicci.
Nanotechnology, vol. 15, 1688-1694, October 2004.

Design Tools for a DNA-guided Self-assembling Carbon Nanotube Technology
    C. Dwyer, V. Johri, M. Cheung, J. Patwardhan, A. Lebeck, D. Sorin.
Nanotechnology, vol. 15, 1240-1245, September 2004.

Semi-empirical SPICE Models for Carbon Nanotube FET Logic
    C. Dwyer, M. Cheung, and D. Sorin.
Proceedings of the 4th IEEE Conference on Nanotechnology, 386-388, August 2004.

Circuit and System Architecture for DNA-Guided Self-Assembly of Nanoelectronics
    J. Patwardhan, C. Dwyer, A. Lebeck, and D. Sorin.
Proceedings of the 1st Conference on the Foundations of Nanoscience: Self-Assembled Architectures and Devices, 344-358, April 2004.


("gate-all-around" = "ring-gated" silicon rod field effect transistor, back then...)

Self-Assembled Computer Architecture: Design and Fabrication Theory
    C. Dwyer, Ph.D. dissertation, University of North Carolina at Chapel Hill, May 2003.
Supervised by Russell Taylor (adviser), Dorothy Erie, John Poulton, Richard Superfine, Leandra Vicci, and Sean Washburn.

Performance Simulation of Nanoscale Silicon Rod Field-Effect Transistor Logic
    C. Dwyer, R. Taylor, L. Vicci.
IEEE Trans. on Nanotechnology, 2 (2): 69-74, 2003.

Transport Simulation of a Nanoscale Silicon Rod Field-Effect Transistor
    C. Dwyer, R. Taylor, L. Vicci.
Proceedings of the 2nd IEEE Conference on Nanotechnology, 401-404, Arlington, VA, 2002.



DNA functionalized single-walled carbon nanotubes
    C. Dwyer, M. Guthold, M. Falvo, S. Washburn, R. Superfine, and D. Erie.
Nanotechnology, vol. 13, 601-604, September 2002.

Self-assembled Carbon Nanotube Circuitry
    C. Dwyer, M. Guthold, D. Erie, R. Superfine, R. Taylor, S. Washburn.
The 67th Southeastern Section of the American Physical Society (SESAPS), November 2000.

Construction of a Carbon Nanotube Electromechanical Actuator
    P. A. Williams, M. R. Falvo, N. Snider, S. Paulson, R. Superfine, S. Washburn, C. Dwyer, R. Taylor.
The 67th Southeastern Section of the American Physical Society (SESAPS), November 2000.

Carbon Nanotube as an Electromechanical Switch
    P. A. Williams, M. R. Falvo, C. Dwyer, S. Paulson, R. Superfine, R. Taylor, S. Washburn.
The 66th Southeastern Section of the American Physical Society (SESAPS), November 1999.